Projects

Human GeoMx study – ROI selection and celltype enrichment

Human GeoMx study

Dr. Xenia Goldberg Dahl uses GeoMx to study receptor and ligand interactions in human bones.

Murine GeoMx study – ROI selection and celltype enrichment

Murine GeoMx study

Dr. Xenia Goldberg Dahl’s murine GeoMx study to investigate aging and ADO2 disease.

Xenium on sections from mouse and human bone

Mice Xenium study

Dr. El-Masri’s study using Xenium spatial platform to identify osteoclast (OC) and cells near or away from OC.

Human Xenium study

Assist. Prof. Marta Diaz-delCastillo’s study using Xenium spatial platform to investigate the spatial location of Cstk+ and MMP13+ reversal cells. (Find more information about Castillo Team’s work)

Light sheet fluorescence microscopy (LSFM): 3D histology of adipose tissue

Mouse LSFM study

Dr. Ellen Gammelmark Klinggaard (ATLAS, SDU) uses LSFM for 3D histology of cleared adipose tissue, studying the dynamics of adipocytes, macrophages, and endothelial cells during obesity regression. The immunofluorescence labels adipocytes (PLIN1, green), macrophages in crown-like structures (F4/80, red), and endothelial cells in blood vessels (PECAM-1, magenta). The gallery includes an overview, a close-up of the tissue architecture, and a fly-through video of the full 3D vascular network.