Generated by All in One SEO v5.0.0.1, this is an llms.txt file, used by LLMs to index the site. # DanSIC DanSIC ## Sitemaps - [XML Sitemap](https://www.dansic.dk/sitemap.xml): Contains all public & indexable URLs for this website. ## Posts - [VS200 Slidescanner, Olympus](https://www.dansic.dk/2023/08/03/vs2000-slidescanner-olympus/) - Company website: VS200 Slidescanner, Olympus Availability: VS2000 slide scanners are open to researchers. - [Xenium](https://www.dansic.dk/2023/08/03/cosmx-msi/) - Company website: Xenium Platform Availability: Spring 2024 - [Supercomputers](https://www.dansic.dk/2023/08/03/supercomputers/) - We have six supercomputers and offer softwares include HALO, OlyVIA, Imaris, and more. Availability: Currently we only open supercomputers to SDU users with a SDU Net ID. - [MACS iQ 3D software](https://www.dansic.dk/2023/08/03/macs-iq-3d-software/) - Company website: MACS iQ 3D software Availability: MACS iQ 3D software will be released at the end of the year 2023. It will provide image quality improvement functions such as de-noise, de-strips, etc. - [GeoMx DSP](https://www.dansic.dk/2023/08/03/geomx-dsp/) - Company website: Nanostring GeoMx® Digital Spatial Profiler Availability: GeoMx DSP will open to researchers in spring 2024 Reasons to use GeoMx DSP: ➤MULTI-ANALYTE PROFILING — From a single FFPE tissue section: Whole transcriptome RNA (18,000 targets), Highest plex protein (140+ targets) ➤FLEXIBLE PROFILING — Dictated by tissue biology ➤AUTOMATED – Protocols are fully automated ➤HIGH REPRODUCIBILITY — Zero to - [UltraMicroscope Blaze Light Sheet, Miltenyi](https://www.dansic.dk/2023/08/03/light-sheet/) - Company website: UltraMicroscope Blaze Light Sheet Related readings about application of light sheet: ➤Deep learning reveals cancer metastasis and therapeutic antibody targeting in the entire body. Cell. 202 ➤A guidebook for DISCO tissue clearing. Mol Syst Biol. 2021 ➤Distinct molecular profiles of skull bone marrow in health and neurological disorders. Cell. 2023 - [DanSIC will move to a new address in October](https://www.dansic.dk/2023/08/04/dansic-will-move-to-new-address-in-october/) - DanSIC along with The Faculty of Health Sciences will move into the new HEALTH building at Campus Odense from August-December in 2023. Follow more news here. - [Light Sheet 3D Imaging Microscope Is Open to Your Pilot Runs](https://www.dansic.dk/2023/08/04/light-sheet-3d-imaging-microscope-will-be-available-in-mid-october/) - Our Light Sheet Microscope Facility Now Open for Researchers' Pilot Studies! We are thrilled to share some exciting news with the scientific community. At DanSIC, we are dedicated to advancing research and supporting scientists in their quest for discovery. That's why we are pleased to announce that our cutting-edge automated 3D Light Sheet Microscope, Miltenyi - [NX70 CryoStar Advanced Cryostat](https://www.dansic.dk/2023/08/03/nx70-cryostar-advanced-cryostat/) - [PrestoCHILL](https://www.dansic.dk/2023/08/03/prestochill/) - [HALO software](https://www.dansic.dk/2023/08/03/halo-software/) - [Imaris software](https://www.dansic.dk/2023/08/03/imaris-software/) - [Visium software](https://www.dansic.dk/2023/08/03/visium-software/) - [HybEZ™ II Hybridization System](https://www.dansic.dk/2023/08/03/hybez-ii-hybridization-system/) - [Microtome](https://www.dansic.dk/2023/08/03/microtome/) - [Evident OlyVIA software](https://www.dansic.dk/2023/08/03/evident-olyvia-software/) ## Pages - [Home](https://www.dansic.dk/) - The Danish Spatial Imaging Consortium Proudly funded byNovo Nordisk Foundation Feb 27 2025 We are officially part of the national CellX infrastructure We are proud to be officially part of CellX infrastructure in Denmark that is dedicated to single cell and spatial omics analysis. Feb 20 2024 Read our new paper: Bone marrow adipocytes provide - [Projects](https://www.dansic.dk/projects/) - Projects Human GeoMx study – ROI selection and celltype enrichment Human GeoMx study Dr. Xenia Goldberg Dahl uses GeoMx to study receptor and ligand interactions in human bones. Murine GeoMx study – ROI selection and celltype enrichment Murine GeoMx study Dr. Xenia Goldberg Dahl’s murine GeoMx study to investigate aging and ADO2 disease. Xenium on - [Technology](https://www.dansic.dk/technology/) - Technology Expertise We specialize in harnessing cutting-edge spatial technologies to uncover and address complex biological questions. Our capabilities include identifying individual cells and their proximities to cells of interest, clustering and classifying cell types within tissues, and mapping their gene expression profiles. Our work spans a broad spectrum of tissues, soft and hard, paraffin-fixed or frozen, - [Event](https://www.dansic.dk/event/) - Events Course UPCOMING 2nd International Hands-on Course on Bone Histology and Histomorphometry ISBM & EUROD May 11-14, 2027 | Odense, Denmark Course fee: €650. Targets clinicians and researchers with an interest in bone histology and histomorphometry. To register, please download the registration form below, complete it, and submit it by email before 1 February 2027. - [Contact](https://www.dansic.dk/contact/) - Contact Key Contacts Prof. Thomas Levin AndersenHead, DanSICEmail Dr. Ching-Hsin HuangInfrastructure Manager, DanSICEmail Location AddressDanish Spatial Imaging ConsortiumCampusvej 32, Toften, 1. sal5230 Odense MDenmark - [Affiliation](https://www.dansic.dk/affiliation/) - Affiliations DanSIC is a proud member of international research organizations dedicated to advancing single-cell and multi-omics research in biology and medicine. Partner Organization CellX The Danish Single Cell Examination Platform CellX is a national research infrastructure dedicated to single-cell and spatial omics analysis in Denmark. Major nodes include the Aarhus University, University of Southern Denmark - [Publications](https://www.dansic.dk/publications/) - Publications2026JBMRIntratrabecular bone remodeling – a previously overlooked mode of remodeling hyperactivated by parathyroid hormoneThomsen LK, Laursen KS, Sikjær T, Thomsen JS, Andreasen CM, Loundagin L, Harrison K, Underbjerg L, Boel LWT, Hansen D, Dempster D, Cosman F, Wei X, Rizvi AR, Kersh M, Cooper DML, Rejnmark L, Andersen TL*Bone Res.An ITGA11-expressing subpopulation as predictor for - [Team](https://www.dansic.dk/team/) - Team The people and partners behind DanSIC. Organization Steering Committees Uffe HolmskovDean, SDUTina GreenHead, Dept. of Pathology, OUHKirsten KyvikHead, Dept. of Clinical Research DanSIC Core Team Thomas Levin AndersenHead, DanSICAlexander RauchAssist. Prof., Dept. of Mol. Endo.Moustapha KassemHead of Research, Dept. of Endo., OUHMorten Frost NielsenProf., Dept. of Endocrinology, OUHMarta Diaz del CastilloSenior Scientific Consultant / - [Equipments](https://www.dansic.dk/equipments/) - Equipments All 3D imaging Analysis Histology Microsopes Spatial omics UltraMicroscope Blaze Light Sheet, Miltenyi UltraMicroscope Blaze Light Sheet, Miltenyi • 3D imaging, Microsopes GeoMx DSP GeoMx DSP • Spatial omics Xenium Xenium • Spatial omics - [not show-Equipment-old](https://www.dansic.dk/about/) - Equipments Histology NX70 CryoStar Advanced Cryostat PrestoCHILL VS2000 Slidescanner, Olympus HyBEZ II hybridization system Microtome Evident OlyVIA software Spatial omics GeoMx DSP, nanostring CosMx SMI, nanostring Halo software 3D imaging UltraMicroscope Blaze, Miltenyi Imaris software Supercomputers Analysis Halo software Imaris software Supercomputers Visium software Supercomputers Talk to us Have any questions? We are always open - [Be our partner](https://www.dansic.dk/be-our-partners/) - Partnership Collaboration DanSIC staffs and research partner collaboratively work on the project with the aims of co-publication and co-ownership of patents. Service-based partnership DanSIC offers full service for our research partners. Service basis overhead will be added in addition to the fees. Guidelines Step 1. Discuss the project with DanSIC Fill out a “collaboration form” ## Categories - [3D imaging](https://www.dansic.dk/category/uncategorized/) - [Histology](https://www.dansic.dk/category/all/) - [Spatial omics](https://www.dansic.dk/category/spatial-omics/) - [Analysis](https://www.dansic.dk/category/analysis/) - [Microsopes](https://www.dansic.dk/category/microsopes/) - [News](https://www.dansic.dk/category/news/)